macaw.persistenceLayer.demo
Class InMemoryOntologyTermManager

java.lang.Object
  macaw.persistenceLayer.demo.InMemoryCurationConceptManager
      macaw.persistenceLayer.demo.InMemoryOntologyTermManager

public class InMemoryOntologyTermManager
extends InMemoryCurationConceptManager

manages instances of OntologyTerm in memory.

Copyright 2010 Medical Research Council Unit for Lifelong Health and Ageing Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License.

Version:

1.0

Author:

Kevin Garwood (kgarwood@users.sourceforge.net)

Field Summary

Fields inherited from class macaw.persistenceLayer.demo.InMemoryCurationConceptManager

log

Constructor Summary

InMemoryOntologyTermManager(InMemoryChangeEventManager changeEventManager)

Method Summary

void	addOntologyTerm(User user, OntologyTerm ontologyTerm)
void	checkOntologyTermExists(OntologyTerm ontologyTerm)
void	clear()
void	deleteOntologyTerms(User user, java.util.ArrayList<OntologyTerm> ontologyTermsToDelete)
java.util.ArrayList<OntologyTerm>	getAllOntologyTerms(User user)
int	getOntologyTermIdentifier(OntologyTerm ontologyTerm)
OntologyTerm	getOriginalOntologyTerm(OntologyTerm ontologyTerm)
void	updateOntologyTerm(User user, OntologyTerm revisedOntologyTerm)

Methods inherited from class macaw.persistenceLayer.demo.InMemoryCurationConceptManager

registerChangeEvent, registerChangeEvents, setLog

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

InMemoryOntologyTermManager

public InMemoryOntologyTermManager(InMemoryChangeEventManager changeEventManager)

Method Detail

getAllOntologyTerms

public java.util.ArrayList<OntologyTerm> getAllOntologyTerms(User user)
                                                      throws MacawException

Throws:

MacawException

addOntologyTerm

public void addOntologyTerm(User user,
                            OntologyTerm ontologyTerm)
                     throws MacawException

Throws:

MacawException

updateOntologyTerm

public void updateOntologyTerm(User user,
                               OntologyTerm revisedOntologyTerm)
                        throws MacawException

Throws:

MacawException

deleteOntologyTerms

public void deleteOntologyTerms(User user,
                                java.util.ArrayList<OntologyTerm> ontologyTermsToDelete)
                         throws MacawException

Throws:

MacawException

getOriginalOntologyTerm

public OntologyTerm getOriginalOntologyTerm(OntologyTerm ontologyTerm)

getOntologyTermIdentifier

public int getOntologyTermIdentifier(OntologyTerm ontologyTerm)

checkOntologyTermExists

public void checkOntologyTermExists(OntologyTerm ontologyTerm)
                             throws MacawException

Throws:

MacawException

clear

public void clear()