macaw.test.curation
Class TestCurateDerivedVariables

java.lang.Object
  junit.framework.Assert
      junit.framework.TestCase
          macaw.test.curation.MacawCurationTestCase
              macaw.test.curation.TestCurateDerivedVariables

All Implemented Interfaces:

junit.framework.Test

public class TestCurateDerivedVariables
extends MacawCurationTestCase

Copyright 2010 Medical Research Council Unit for Lifelong Health and Ageing Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License.

Version:

1.0

Author:

Kevin Garwood (kgarwood@users.sourceforge.net)

Field Summary

Fields inherited from class macaw.test.curation.MacawCurationTestCase

admin, curationService, jsmith, log

Constructor Summary

TestCurateDerivedVariables()

Method Summary

protected void	setUp()
void	testAssociateOntologyTermA1() associate one ontology term with a variable
void	testAssociateOntologyTermE1() associate a non-existent ontology term with a variable
void	testAssociateOntologyTermE2() associate an ontology term with a non-existent variable
void	testAssociateOntologyTermE3() associate multiple ontology terms with a variable when those associations already exist.
void	testAssociateOntologyTermN1() associate multiple ontology terms with a variable
void	testAssociateSourceVariableA1() associate a single source variable with a derived variable
void	testAssociateSourceVariableE1() associate a source variable with a non-existent derived variable
void	testAssociateSourceVariableE2() associate a non-existent source variable with a derived variable
void	testAssociateSourceVariableE3() associate a source variable with a derived variable where the association already exists
void	testAssociateSourceVariableN1() associate multiple source variables with a derived variable
void	testDerivedVariableAssociateDocumentA1() associate a single supporting documents with a derived variable
void	testDerivedVariableAssociateDocumentE1() associate a document with a non-existent derived variable
void	testDerivedVariableAssociateDocumentE2() associate a non-existent document with a derived variable
void	testDerivedVariableAssociateDocumentE3() associate a single supporting documents with a derived variable where the association already exists
void	testDerivedVariableAssociateDocumentN1() associate one or supporting documents with a derived variable
void	testDerivedVariableDisassociateDocumentA1() disassociate the only supporting document that is associated with a derived variable
void	testDerivedVariableDisassociateDocumentE1() disassociate a supporting document with a non-existent derived variables
void	testDerivedVariableDisassociateDocumentE2() disassociate a non-existent supporting document with a derived variables
void	testDerivedVariableDisassociateDocumentE3() disassociate a supporting document with a derived variable where no associations exist
void	testDerivedVariableDisassociateDocumentN1() disassociate supporting document that is associated with a derived variable
void	testDisassociateOntologyTermA1() disassociate the only ontology term that is associated with a variable
void	testDisassociateOntologyTermE1() disassociate a non-existent ontology term with a variable
void	testDisassociateOntologyTermE2() disassociate an ontology term with a non-existent variable
void	testDisassociateOntologyTermE3() disassociate an ontology term with a variable where no associations exist
void	testDisassociateOntologyTermN1() disassociate multiple ontology terms from a variable
void	testDisassociateSourceVariableA1() disassociate the only source variable associated with a derived variable
void	testDisassociateSourceVariableE1() disassociate a non-existent source variable from a a derived variable
void	testDisassociateSourceVariableE2() disassociate source variables from a a non-existent derived variable
void	testDisassociateSourceVariableE3() disassociate a source variable from a a derived variable where no association exists
void	testDisassociateSourceVariableN1() disassociate source variables from a derived variable

Methods inherited from class macaw.test.curation.MacawCurationTestCase

tearDown

Methods inherited from class junit.framework.TestCase

countTestCases, createResult, getName, run, run, runBare, runTest, setName, toString

Methods inherited from class junit.framework.Assert

assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertFalse, assertFalse, assertNotNull, assertNotNull, assertNotSame, assertNotSame, assertNull, assertNull, assertSame, assertSame, assertTrue, assertTrue, fail, fail, failNotEquals, failNotSame, failSame

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

TestCurateDerivedVariables

public TestCurateDerivedVariables()

Method Detail

setUp

protected void setUp()
              throws java.lang.Exception

Overrides:

setUp in class MacawCurationTestCase

Throws:

java.lang.Exception

testDerivedVariableAssociateDocumentN1

public void testDerivedVariableAssociateDocumentN1()

associate one or supporting documents with a derived variable

testDerivedVariableAssociateDocumentA1

public void testDerivedVariableAssociateDocumentA1()

associate a single supporting documents with a derived variable

testDerivedVariableAssociateDocumentE1

public void testDerivedVariableAssociateDocumentE1()

associate a document with a non-existent derived variable

testDerivedVariableAssociateDocumentE2

public void testDerivedVariableAssociateDocumentE2()

associate a non-existent document with a derived variable

testDerivedVariableAssociateDocumentE3

public void testDerivedVariableAssociateDocumentE3()

associate a single supporting documents with a derived variable where the association already exists

testDerivedVariableDisassociateDocumentN1

public void testDerivedVariableDisassociateDocumentN1()

disassociate supporting document that is associated with a derived variable

testDerivedVariableDisassociateDocumentA1

public void testDerivedVariableDisassociateDocumentA1()

disassociate the only supporting document that is associated with a derived variable

testDerivedVariableDisassociateDocumentE1

public void testDerivedVariableDisassociateDocumentE1()

disassociate a supporting document with a non-existent derived variables

testDerivedVariableDisassociateDocumentE2

public void testDerivedVariableDisassociateDocumentE2()

disassociate a non-existent supporting document with a derived variables

testDerivedVariableDisassociateDocumentE3

public void testDerivedVariableDisassociateDocumentE3()

disassociate a supporting document with a derived variable where no associations exist

testAssociateOntologyTermN1

public void testAssociateOntologyTermN1()

associate multiple ontology terms with a variable

testAssociateOntologyTermA1

public void testAssociateOntologyTermA1()

associate one ontology term with a variable

testAssociateOntologyTermE1

public void testAssociateOntologyTermE1()

associate a non-existent ontology term with a variable

testAssociateOntologyTermE2

public void testAssociateOntologyTermE2()

associate an ontology term with a non-existent variable

testAssociateOntologyTermE3

public void testAssociateOntologyTermE3()

associate multiple ontology terms with a variable when those associations already exist.

testDisassociateOntologyTermN1

public void testDisassociateOntologyTermN1()

disassociate multiple ontology terms from a variable

testDisassociateOntologyTermA1

public void testDisassociateOntologyTermA1()

disassociate the only ontology term that is associated with a variable

testDisassociateOntologyTermE1

public void testDisassociateOntologyTermE1()

disassociate a non-existent ontology term with a variable

testDisassociateOntologyTermE2

public void testDisassociateOntologyTermE2()

disassociate an ontology term with a non-existent variable

testDisassociateOntologyTermE3

public void testDisassociateOntologyTermE3()

disassociate an ontology term with a variable where no associations exist

testAssociateSourceVariableN1

public void testAssociateSourceVariableN1()

associate multiple source variables with a derived variable

testAssociateSourceVariableA1

public void testAssociateSourceVariableA1()

associate a single source variable with a derived variable

testAssociateSourceVariableE1

public void testAssociateSourceVariableE1()

associate a source variable with a non-existent derived variable

testAssociateSourceVariableE2

public void testAssociateSourceVariableE2()

associate a non-existent source variable with a derived variable

testAssociateSourceVariableE3

public void testAssociateSourceVariableE3()

associate a source variable with a derived variable where the association already exists

testDisassociateSourceVariableN1

public void testDisassociateSourceVariableN1()

disassociate source variables from a derived variable

testDisassociateSourceVariableA1

public void testDisassociateSourceVariableA1()

disassociate the only source variable associated with a derived variable

testDisassociateSourceVariableE1

public void testDisassociateSourceVariableE1()

disassociate a non-existent source variable from a a derived variable

testDisassociateSourceVariableE2

public void testDisassociateSourceVariableE2()

disassociate source variables from a a non-existent derived variable

testDisassociateSourceVariableE3

public void testDisassociateSourceVariableE3()

disassociate a source variable from a a derived variable where no association exists